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Journal Article

Montagud A, Béal J, Tobalina L, Traynard P, Subramanian V, Szalai B, Alföldi R, Puskás L, Valencia A, Barillot E et al.. Submitted. Patient-specific Boolean models of signaling networks guide personalized treatments.

Letort G, Montagud A, Stoll G, Heiland R, Calzone EBAZL, Macklin P. 2018. PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling. Bioinformatics. 35(7):1188–1196.

Mbodj A, Gustafson HE, Ciglar L, Junion G, GONZALEZ A, GIRARDOT C, PERRIN L, Furlong EEM, Thieffry D. 2016. Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes. PLoS Comput Biol. 12:1-17. Abstract

Micchelli CA, The I, Selva E, Mogila V, Perrimon N. 2002. Rasp, a putative transmembrane acyltransferase, is required for Hedgehog signaling.. Development (Cambridge, England). 129(4):843-51. Abstract

Tauc HM, Mann T, Werner K, Pandur P. 2012. A role for Drosophila Wnt-4 in heart development.. Genesis (New York, N.Y. : 2000). 50(6):466-81. Abstract

Michelson AM. 2003. Running interference for hedgehog signaling.. Science's STKE : signal transduction knowledge environment. 2003(192):PE30. Abstract

Chamoun Z, Mann RK, Nellen D, von Kessler DP, Bellotto M, Beachy PA, Basler K. 2001. Skinny hedgehog, an acyltransferase required for palmitoylation and activity of the hedgehog signal.. Science (New York, N.Y.). 293(5537):2080-4. Abstract

Morisato D, Anderson KV. 1994. The spätzle gene encodes a component of the extracellular signaling pathway establishing the dorsal-ventral pattern of the Drosophila embryo.. Cell. 76(4):677-88. Abstract

Kamiya Y, Miyazono K, Miyazawa K. 2008. Specificity of the inhibitory effects of Dad on TGF-beta family type I receptors, Thickveins, Saxophone, and Baboon in Drosophila.. FEBS letters. 582(17):2496-500. Abstract

Book Chapter

Sánchez-Osorio I, Hernández-Martínez1 CA, Martínez-Antonio A. Submitted. Exploring Asymmetric Cell Division in Caulobacter Crescentus Using Logic Modeling.

Chaouiya C, Remy E, Mossé B, Thieffry D. 2003. Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework. Positive Systems. 294:830-832.